[Lilab] Group Meeting - 10/16/24

Brian Tran brian.tran002 at email.ucr.edu
Wed Oct 9 16:42:50 PDT 2024


Hi everyone,

I will be introducing bulk RNA-seq deconvolution and five bulk
deconvolution methods that infer cell-type proportions. The methods and
their references follows:

1) Bisque: https://www.nature.com/articles/s41467-020-15816-6
2) MuSiC: https://www.nature.com/articles/s41467-018-08023-x
3) DWLS: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6611906/
4) FARDEEP: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6522071/
5) CIBERSORT: https://www.nature.com/articles/nmeth.3337

Sincerely,
Brian Tran
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